Browse entries in the PDBbind-CN Database

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Related entries of code: 4nni
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
No similar entries are found!
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
5gj9RCSB PDB    PDBbindVGL

Entry Information
PDB ID4nni
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameMycobacterium tuberculosis ribosomal protein S1 CTD
Ligand NameVGL
EC.Number E.C.-.-.-.-
Resolution 2.64(Å)
Affinity (Kd/Ki/IC50)Kd=3.13uM
Release Year2014
Protein/NA SequenceCheck fasta file
Primary Reference (2015) Mol.Microbiol. Vol. 95: pp. 791-803
Ligand Properties
Formula C5H4N2O2
Molecular Weight 124.097
Exact Mass 124.027
No. of atoms 13
No. of bonds 13
Polar Surface Area 63.08
LOGP Value 0.43      (Computed with XLOGP3)
0.17      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 0
No. of Hydrogen Bond Acceptors: 4
No. of Rotatable Bonds: 0
No. of Nitrogen and Oxygen Atoms: 4
No. of Rings: 1
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P9WH43  
Entrez Gene IDNCBI Entrez Gene ID: 885188  
ASDInformation of known allosteric effects of PDB entries

 
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