Browse entries in the PDBbind-CN Database

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Related entries of code: 4omj
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
4omkRCSB PDB    PDBbind278aa, >4OMK_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID4omj
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NameSEC14-like domain of supernatant protein factor (SPF)
Ligand Name2TX
EC.Number E.C.-.-.-.-
Resolution 1.6(Å)
Affinity (Kd/Ki/IC50)Kd=5.44uM
Release Year2015
Protein/NA SequenceCheck fasta file
Primary Reference (2015) J.Struct.Biol. Vol. 190: pp. 261-270
Ligand Properties
Formula C30H60O
Molecular Weight 436.797
Exact Mass 436.464
No. of atoms 91
No. of bonds 91
Polar Surface Area 12.53
LOGP Value 12.80      (Computed with XLOGP3)
10.22      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 0
No. of Hydrogen Bond Acceptors: 0
No. of Rotatable Bonds: 20
No. of Nitrogen and Oxygen Atoms: 1
No. of Rings: 1
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): O76054  
Entrez Gene IDNCBI Entrez Gene ID: 23541  
ASDInformation of known allosteric effects of PDB entries

 
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