Browse entries in the PDBbind-CN Database

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Related entries of code: 4ph4
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
4oysRCSB PDB    PDBbind601aa, >4OYS_1|Chain... at 97%
4uwfRCSB PDB    PDBbind601aa, >4UWF_1|Chain... at 97%
4uwgRCSB PDB    PDBbind601aa, >4UWG_1|Chain... at 97%
4uwhRCSB PDB    PDBbind601aa, >4UWH_1|Chain... at 97%
4uwkRCSB PDB    PDBbind601aa, >4UWK_1|Chain... at 97%
4uwlRCSB PDB    PDBbind601aa, >4UWL_1|Chain... at 97%
6i3uRCSB PDB    PDBbind615aa, >6I3U_1|Chain... at 94%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID4ph4
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NamePhosphatidylinositol 3-kinase catalytic subunit type 3 VPS34
Ligand Name2UG
EC.Number E.C.2.7.1.137
Resolution 2.8(Å)
Affinity (Kd/Ki/IC50)IC50=18nM
Release Year2014
Protein/NA SequenceCheck fasta file
Primary Reference (2014) Nat.Cell Biol. Vol. 16: pp. 1069-1079
Ligand Properties
Formula C17H17N7
Molecular Weight 319.364
Exact Mass 319.155
No. of atoms 41
No. of bonds 44
Polar Surface Area 102.5
LOGP Value 2.01      (Computed with XLOGP3)
3.26      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 5
No. of Rotatable Bonds: 5
No. of Nitrogen and Oxygen Atoms: 7
No. of Rings: 4
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q8NEB9  
Entrez Gene IDNCBI Entrez Gene ID: 5289  
ASDInformation of known allosteric effects of PDB entries

 
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