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Related entries of code: 4pkb
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
No similar entries are found!
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!
Entry Information
PDB ID4pkb
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NamePatatin-17
Ligand NameMAY
EC.Number E.C.3.1.1
Resolution 2.09(Å)
Affinity (Kd/Ki/IC50)IC50=0.116uM
Release Year2014
Protein/NA SequenceCheck fasta file
Primary Reference (2014) Plos One Vol. 9. e108245: pp.1-10
Ligand Properties
Formula C3H9O2P
Molecular Weight 108.076
Exact Mass 108.034
No. of atoms 15
No. of bonds 14
Polar Surface Area 49.77
LOGP Value -0.22      (Computed with XLOGP3)
1.13      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 0
No. of Hydrogen Bond Acceptors: 1
No. of Rotatable Bonds: 2
No. of Nitrogen and Oxygen Atoms: 2
No. of Rings: 0
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q8LPW4  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries
 
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