Browse entries in the PDBbind-CN Database

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Related entries of code: 4wko
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
3nm6RCSB PDB    PDBbind230aa, >3NM6_1|Chain... at 99%
4ffsRCSB PDB    PDBbind239aa, >4FFS_1|Chain... at 98%
4wknRCSB PDB    PDBbind245aa, >4WKN_1|Chain... *
4wkpRCSB PDB    PDBbind245aa, >4WKP_1|Chains... at 100%
4ynbRCSB PDB    PDBbind245aa, >4YNB_1|Chain... at 100%
4yo8RCSB PDB    PDBbind245aa, >4YO8_1|Chains... at 100%
6dyyRCSB PDB    PDBbind245aa, >6DYY_1|Chains... at 100%
6dywRCSB PDB    PDBbind245aa, >6DYW_1|Chains... at 100%
6dyvRCSB PDB    PDBbind245aa, >6DYV_1|Chains... at 100%
6dyuRCSB PDB    PDBbind245aa, >6DYU_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
4f3kRCSB PDB    PDBbindHCE
Entry Information
PDB ID4wko
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NameHelicobacter pylori 5'-methylthioadenosine/S-adenosyl homocysteine nucleosidase (MTAN)
Ligand NameHCE
EC.Number E.C.3.2.2.30
Resolution 1.9(Å)
Affinity (Kd/Ki/IC50)Ki=0.34nM
Release Year2015
Protein/NA SequenceCheck fasta file
Primary Reference (2015) J.Am.Chem.Soc. Vol. 137: pp. 14275-14280
Ligand Properties
Formula C16H26N5O2S
Molecular Weight 352.475
Exact Mass 352.181
No. of atoms 50
No. of bonds 52
Polar Surface Area 137.79
LOGP Value 0.00      (Computed with XLOGP3)
1.57      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 5
No. of Hydrogen Bond Acceptors: 4
No. of Rotatable Bonds: 10
No. of Nitrogen and Oxygen Atoms: 7
No. of Rings: 3
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q9ZMY2  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries
 
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