Browse entries in the PDBbind-CN Database

Display Options: Structure:  




Goto PDB code:

3D presentation of molecule is powered by 3Dmol, which supports all modern browsers and mobile devices via WebGL.

           
Hold mouse button: left to rotate,middle to shift,right to zoom

Related entries of code: 4xtp
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
4xtmRCSB PDB    PDBbind250aa, >4XTM_1|Chain... *
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID4xtp
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameSeed lectin
Ligand NameTNR
EC.Number E.C.-.-.-.-
Resolution 1.97(Å)
Affinity (Kd/Ki/IC50)Kd=55.40uM
Release Year2016
Protein/NA SequenceCheck fasta file
Primary Reference (2016) Int.J.Biochem.Cell Biol. Vol. 72: pp. 27-39
Ligand Properties
Formula C11H21N2O8
Molecular Weight 309.293
Exact Mass 309.130
No. of atoms 42
No. of bonds 42
Polar Surface Area 173.19
LOGP Value -4.76      (Computed with XLOGP3)
-3.97      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 5
No. of Hydrogen Bond Acceptors: 6
No. of Rotatable Bonds: 9
No. of Nitrogen and Oxygen Atoms: 10
No. of Rings: 1
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P81371  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries

 
This site has been visited times since Nov 2007.


Copyright ©2007-2024    涓婃捣鐩堣禌鎬濅俊鎭鎶鏈夐檺鍏徃    缃戠珯澶囨鍙凤細娌狪CP澶2021015625鍙-3    娌叕缃戝畨澶囷細姝e湪鐢宠涓


Technical Support锛堟妧鏈敮鎸侊級: yingsaisi@foxmail.com