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Related entries of code: 4yb5
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
4yb6RCSB PDB    PDBbind300aa, >4YB6_1|Chains... at 100%
4yb7RCSB PDB    PDBbind300aa, >4YB7_1|Chains... at 100%
5ubgRCSB PDB    PDBbind226aa, >5UBG_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1hslRCSB PDB    PDBbindHIS
1lagRCSB PDB    PDBbindHIS
2q2cRCSB PDB    PDBbindHIS
4oeuRCSB PDB    PDBbindHIS
4oflRCSB PDB    PDBbindHIS
4yb6RCSB PDB    PDBbindHIS
5lhuRCSB PDB    PDBbindHIS
6mkwRCSB PDB    PDBbindHIS
Entry Information
PDB ID4yb5
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NameATP phosphoribosyltransferase
Ligand NameHIS
EC.Number E.C.2.4.2.17
Resolution 2.24(Å)
Affinity (Kd/Ki/IC50)Kd=19.3uM
Release Year2016
Protein/NA SequenceCheck fasta file
Primary Reference (2016) Protein Sci. Vol. 25: pp. 1492-1506
Ligand Properties
Formula C6H10N3O2
Molecular Weight 156.162
Exact Mass 156.077
No. of atoms 21
No. of bonds 21
Polar Surface Area 93.62
LOGP Value -2.35      (Computed with XLOGP3)
-1.35      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 3
No. of Rotatable Bonds: 2
No. of Nitrogen and Oxygen Atoms: 5
No. of Rings: 1
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q5HSJ4  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries
 
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