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Related entries of code: 4z8m
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
No similar entries are found!
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1dvaRCSB PDB    PDBbind19-mer
1idgRCSB PDB    PDBbind19-mer
1ilqRCSB PDB    PDBbind19-mer
1iwqRCSB PDB    PDBbind19-mer
1katRCSB PDB    PDBbind19-mer
1lxhRCSB PDB    PDBbind19-mer
1oqpRCSB PDB    PDBbind19-mer
2asuRCSB PDB    PDBbind19-mer
2jqkRCSB PDB    PDBbind19-mer
2k7lRCSB PDB    PDBbind19-mer
2kupRCSB PDB    PDBbind19-mer
2lloRCSB PDB    PDBbind19-mer
2llqRCSB PDB    PDBbind19-mer
2nd0RCSB PDB    PDBbind19-mer
2pl9RCSB PDB    PDBbind19-mer
2rquRCSB PDB    PDBbind19-mer
2yq6RCSB PDB    PDBbind19-mer
3bimRCSB PDB    PDBbind19-mer
3bl2RCSB PDB    PDBbind19-mer
3bu8RCSB PDB    PDBbind19-mer
3eu7RCSB PDB    PDBbind19-mer
3h52RCSB PDB    PDBbind19-mer
3pluRCSB PDB    PDBbind19-mer
3q6sRCSB PDB    PDBbind19-mer
3qnjRCSB PDB    PDBbind19-mer
3tiwRCSB PDB    PDBbind19-mer
3tzdRCSB PDB    PDBbind19-mer
3uvuRCSB PDB    PDBbind19-mer
3v2oRCSB PDB    PDBbind19-mer
3v7dRCSB PDB    PDBbind19-mer
3zhaRCSB PDB    PDBbind19-mer
4a1wRCSB PDB    PDBbind19-mer
4bpiRCSB PDB    PDBbind19-mer
4bpjRCSB PDB    PDBbind19-mer
4hpyRCSB PDB    PDBbind19-mer
4j24RCSB PDB    PDBbind19-mer
4mzjRCSB PDB    PDBbind19-mer
4mzkRCSB PDB    PDBbind19-mer
4oykRCSB PDB    PDBbind19-mer
4qxtRCSB PDB    PDBbind19-mer
4qy8RCSB PDB    PDBbind19-mer
4tknRCSB PDB    PDBbind19-mer
4xekRCSB PDB    PDBbind19-mer
4xgzRCSB PDB    PDBbind19-mer
5bjtRCSB PDB    PDBbind19-mer
5ekgRCSB PDB    PDBbind19-mer
5f67RCSB PDB    PDBbind19-mer
5gmiRCSB PDB    PDBbind19-mer
5gmjRCSB PDB    PDBbind19-mer
5gowRCSB PDB    PDBbind19-mer
5jeoRCSB PDB    PDBbind19-mer
5jerRCSB PDB    PDBbind19-mer
5k6sRCSB PDB    PDBbind19-mer
5mavRCSB PDB    PDBbind19-mer
5nxqRCSB PDB    PDBbind19-mer
5uw5RCSB PDB    PDBbind19-mer
5uwpRCSB PDB    PDBbind19-mer
5v2pRCSB PDB    PDBbind19-mer
5v2qRCSB PDB    PDBbind19-mer
5ybeRCSB PDB    PDBbind19-mer
6bvbRCSB PDB    PDBbind19-mer
6fkqRCSB PDB    PDBbind19-mer
6milRCSB PDB    PDBbind19-mer
6r8iRCSB PDB    PDBbind19-mer
6oieRCSB PDB    PDBbind19-mer
6h8cRCSB PDB    PDBbind19-mer
5v5oRCSB PDB    PDBbind19-mer
5j7jRCSB PDB    PDBbind19-mer
Entry Information
PDB ID4z8m
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameTNF receptor-associated factor 6
Ligand Name19-mer
EC.Number E.C.6.3.2.-
Resolution 2.95(Å)
Affinity (Kd/Ki/IC50)Kd=36nM
Release Year2015
Protein/NA SequenceCheck fasta file
Primary Reference (2015) J.Biol.Chem. Vol. 290: pp. 26811-26820
Ligand Properties
Formula C42H65N11O16
Molecular Weight 980.030
Exact Mass 979.461
No. of atoms 134
No. of bonds 135
Polar Surface Area 454.51
LOGP Value -5.18      (Computed with XLOGP3)
-2.92      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 11
No. of Hydrogen Bond Acceptors: 16
No. of Rotatable Bonds: 36
No. of Nitrogen and Oxygen Atoms: 27
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q7Z434  Q9Y4K3  
Entrez Gene IDNCBI Entrez Gene ID: 57506  7189  
ASDInformation of known allosteric effects of PDB entries
 
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