Browse entries in the PDBbind-CN Database

Display Options: Structure:  




Goto PDB code:

3D presentation of molecule is powered by 3Dmol, which supports all modern browsers and mobile devices via WebGL.

           
Hold mouse button: left to rotate,middle to shift,right to zoom

Related entries of code: 4zme
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
4zmfRCSB PDB    PDBbind307aa, >4ZMF_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1dgmRCSB PDB    PDBbindADN
1odiRCSB PDB    PDBbindADN
2fqyRCSB PDB    PDBbindADN
2gl0RCSB PDB    PDBbindADN
2ydoRCSB PDB    PDBbindADN
3axzRCSB PDB    PDBbindADN
3ay0RCSB PDB    PDBbindADN
3f8wRCSB PDB    PDBbindADN
4ckiRCSB PDB    PDBbindADN
4ckjRCSB PDB    PDBbindADN
4pd9RCSB PDB    PDBbindADN
5aqfRCSB PDB    PDBbindADN
5km9RCSB PDB    PDBbindADN
5lvnRCSB PDB    PDBbindADN
6exiRCSB PDB    PDBbindADN
Entry Information
PDB ID4zme
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NameAlpha-kinase Domain of Myosin-II Heavy Chain Kinase A
Ligand NameADN
EC.Number E.C.2.7.11.7
Resolution 1.98(Å)
Affinity (Kd/Ki/IC50)Kd=50uM
Release Year2015
Protein/NA SequenceCheck fasta file
Primary Reference (2015) J.Biol.Chem. Vol. 290: pp. 23935-23946
Ligand Properties
Formula C10H13N5O4
Molecular Weight 267.241
Exact Mass 267.097
No. of atoms 32
No. of bonds 34
Polar Surface Area 139.54
LOGP Value -1.90      (Computed with XLOGP3)
-1.40      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 4
No. of Hydrogen Bond Acceptors: 6
No. of Rotatable Bonds: 5
No. of Nitrogen and Oxygen Atoms: 9
No. of Rings: 3
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P42527  
Entrez Gene IDNCBI Entrez Gene ID: 8628066  
ASDInformation of known allosteric effects of PDB entries
 
This site has been visited times since Nov 2007.


Copyright ©2007-2024    涓婃捣鐩堣禌鎬濅俊鎭鎶鏈夐檺鍏徃    缃戠珯澶囨鍙凤細娌狪CP澶2021015625鍙-3    娌叕缃戝畨澶囷細姝ｅ湪鐢宠涓


Technical Support锛堟妧鏈敮鎸侊級: yingsaisi@foxmail.com