Browse entries in the PDBbind-CN Database

Display Options: Structure:  




Goto PDB code:

3D presentation of molecule is powered by 3Dmol, which supports all modern browsers and mobile devices via WebGL.

           
Hold mouse button: left to rotate,middle to shift,right to zoom

Related entries of code: 5a0a
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1b0fRCSB PDB    PDBbind218aa, >1B0F_1|Chain... *
1h1bRCSB PDB    PDBbind218aa, >1H1B_1|Chains... at 99%
3q77RCSB PDB    PDBbind218aa, >3Q77_1|Chain... at 99%
5a09RCSB PDB    PDBbind218aa, >5A09_1|Chain... at 99%
5a0bRCSB PDB    PDBbind218aa, >5A0B_1|Chain... at 99%
5a0cRCSB PDB    PDBbind218aa, >5A0C_1|Chains... at 99%
5a8xRCSB PDB    PDBbind218aa, >5A8X_1|Chain... at 99%
5a8yRCSB PDB    PDBbind218aa, >5A8Y_1|Chain... at 99%
5a8zRCSB PDB    PDBbind218aa, >5A8Z_1|Chain... at 99%
5abwRCSB PDB    PDBbind218aa, >5ABW_1|Chain... at 99%
6f5mRCSB PDB    PDBbind218aa, >6F5M_1|Chains... at 99%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!
Entry Information
PDB ID5a0a
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Nameneutrophil elastase
Ligand NameJJS
EC.Number E.C.-.-.-.-
Resolution 1.78(Å)
Affinity (Kd/Ki/IC50)IC50=20nM
Release Year2015
Protein/NA SequenceCheck fasta file
Primary Reference (2015) ChemMedChem Vol. 10: pp. 1163-1173
Ligand Properties
Formula C20H15F3N4O2
Molecular Weight 400.354
Exact Mass 400.115
No. of atoms 44
No. of bonds 46
Polar Surface Area 86.09
LOGP Value 2.45      (Computed with XLOGP3)
4.50      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 4
No. of Rotatable Bonds: 3
No. of Nitrogen and Oxygen Atoms: 6
No. of Rings: 3
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P08246  
Entrez Gene IDNCBI Entrez Gene ID: 1991  
ASDInformation of known allosteric effects of PDB entries
 
This site has been visited times since Nov 2007.


Copyright ©2007-2024    涓婃捣鐩堣禌鎬濅俊鎭鎶鏈夐檺鍏徃    缃戠珯澶囨鍙凤細娌狪CP澶2021015625鍙-3    娌叕缃戝畨澶囷細姝ｅ湪鐢宠涓


Technical Support锛堟妧鏈敮鎸侊級: yingsaisi@foxmail.com