Browse entries in the PDBbind-CN Database

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Related entries of code: 5avf
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
5aveRCSB PDB    PDBbind257aa, >5AVE_1|Chain... *
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
6stlRCSB PDB    PDBbindTAU

Entry Information
PDB ID5avf
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein Nameperiplasmic fragment of Mlp37 (Mlp37p ligand binding domain)
Ligand NameTAU
EC.Number E.C.-.-.-.-
Resolution 1.95(Å)
Affinity (Kd/Ki/IC50)Kd=3.2uM
Release Year2016
Protein/NA SequenceCheck fasta file
Primary Reference (2016) Sci Rep Vol. 6: pp. 20866-20866
Ligand Properties
Formula C2H10NO3S
Molecular Weight 128.171
Exact Mass 128.038
No. of atoms 17
No. of bonds 16
Polar Surface Area 113.63
LOGP Value -4.03      (Computed with XLOGP3)
-0.55      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 3
No. of Rotatable Bonds: 1
No. of Nitrogen and Oxygen Atoms: 4
No. of Rings: 0
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q9KL26  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries

 
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