Browse entries in the PDBbind-CN Database

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Related entries of code: 5c6o
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
No similar entries are found!
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
5c6pRCSB PDB    PDBbind4YH
Entry Information
PDB ID5c6o
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameBH2163 protein, DinF-BH
Ligand Name4YH
EC.Number E.C.-.-.-.-
Resolution 3(Å)
Affinity (Kd/Ki/IC50)Ki>200uM
Release Year2015
Protein/NA SequenceCheck fasta file
Primary Reference (2015) Nat Commun Vol. 6: pp. 7995-8005
Ligand Properties
Formula C27H39N2O4
Molecular Weight 455.610
Exact Mass 455.291
No. of atoms 72
No. of bonds 73
Polar Surface Area 65.15
LOGP Value 5.36      (Computed with XLOGP3)
3.68      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 1
No. of Rotatable Bonds: 13
No. of Nitrogen and Oxygen Atoms: 6
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q9KAX3  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries
 
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