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Related entries of code: 5cks
Entries with 90% protein sequence similarity cutoff in PDBbind
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Complexes with the same small molecule ligand
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No complexes with the same small molecule ligand are found!
Entry Information
PDB ID5cks
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NameDAHP (3-deoxy-D-arabinoheptulosonate-7-phosphate) Synthase
Ligand Name52L
EC.Number E.C.2.5.1.54
Resolution 2.12(Å)
Affinity (Kd/Ki/IC50)Kd=3.1uM
Release Year2016
Protein/NA SequenceCheck fasta file
Primary Reference (2016) Biochemistry Vol. 55: pp. 6617-6629
Ligand Properties
Formula C7H15NO10P
Molecular Weight 304.168
Exact Mass 304.043
No. of atoms 34
No. of bonds 33
Polar Surface Area 214.09
LOGP Value -2.50      (Computed with XLOGP3)
-2.95      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 4
No. of Hydrogen Bond Acceptors: 9
No. of Rotatable Bonds: 10
No. of Nitrogen and Oxygen Atoms: 11
No. of Rings: 0
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P0AB91  
Entrez Gene IDNCBI Entrez Gene ID: 61751811  945605  
ASDInformation of known allosteric effects of PDB entries
 
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