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Related entries of code: 5cp9
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
5cs3RCSB PDB    PDBbind183aa, >5CS3_1|Chains... at 100%
5cs5RCSB PDB    PDBbind183aa, >5CS5_1|Chains... at 100%
5ct1RCSB PDB    PDBbind183aa, >5CT1_1|Chains... at 100%
5ct2RCSB PDB    PDBbind183aa, >5CT2_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID5cp9
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NameHepatocyte growth factor
Ligand Name6O5
EC.Number E.C.-.-.-.-
Resolution 1.9(Å)
Affinity (Kd/Ki/IC50)Kd=0.31mM
Release Year2015
Protein/NA SequenceCheck fasta file
Primary Reference (2015) Chem. Sci., 6, 6147-6157
Ligand Properties
Formula C7H8O3
Molecular Weight 140.137
Exact Mass 140.047
No. of atoms 18
No. of bonds 18
Polar Surface Area 50.44
LOGP Value 2.22      (Computed with XLOGP3)
1.30      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 0
No. of Hydrogen Bond Acceptors: 2
No. of Rotatable Bonds: 2
No. of Nitrogen and Oxygen Atoms: 3
No. of Rings: 1
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P14210  
Entrez Gene IDNCBI Entrez Gene ID: 3082  
ASDInformation of known allosteric effects of PDB entries

 
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