Browse entries in the PDBbind-CN Database

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Related entries of code: 5d48
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
2hnxRCSB PDB    PDBbind136aa, >2HNX_1|Chain... at 100%
5d45RCSB PDB    PDBbind152aa, >5D45_1|Chain... *
5d47RCSB PDB    PDBbind152aa, >5D47_1|Chain... at 100%
5d4aRCSB PDB    PDBbind152aa, >5D4A_1|Chain... at 100%
5hz8RCSB PDB    PDBbind135aa, >5HZ8_1|Chain... at 94%
5y0fRCSB PDB    PDBbind152aa, >5Y0F_1|Chain... at 100%
5y0gRCSB PDB    PDBbind152aa, >5Y0G_1|Chain... at 100%
5y0xRCSB PDB    PDBbind152aa, >5Y0X_1|Chain... at 100%
5y12RCSB PDB    PDBbind152aa, >5Y12_1|Chain... at 100%
5y13RCSB PDB    PDBbind152aa, >5Y13_1|Chain... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID5d48
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein Namehuman Fatty acid-binding protein, adipocyte (FABP4)
Ligand NameL96
EC.Number E.C.-.-.-.-
Resolution 1.81(Å)
Affinity (Kd/Ki/IC50)Ki=0.03uM
Release Year2016
Protein/NA SequenceCheck fasta file
Primary Reference (2016) Acs Med.Chem.Lett. Vol. 7: pp. 435-439
Ligand Properties
Formula C28H31N3O3
Molecular Weight 457.564
Exact Mass 457.237
No. of atoms 65
No. of bonds 69
Polar Surface Area 80.14
LOGP Value 6.94      (Computed with XLOGP3)
6.45      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 3
No. of Rotatable Bonds: 7
No. of Nitrogen and Oxygen Atoms: 6
No. of Rings: 5
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P15090  
Entrez Gene IDNCBI Entrez Gene ID: 2167  
ASDInformation of known allosteric effects of PDB entries

 
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