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Related entries of code: 5elz
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
2ewsRCSB PDB    PDBbind287aa, >2EWS_1|Chains... *
4m7xRCSB PDB    PDBbind273aa, >4M7X_1|Chain... at 97%
4m7yRCSB PDB    PDBbind273aa, >4M7Y_1|Chains... at 97%
5jicRCSB PDB    PDBbind273aa, >5JIC_1|Chain... at 97%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID5elz
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameStaphylococcus aureus Type II pantothenate kinase (SaPanKII)
Ligand Name3V9
EC.Number E.C.2.7.1.33
Resolution 1.8(Å)
Affinity (Kd/Ki/IC50)IC50=0.46uM
Release Year2016
Protein/NA SequenceCheck fasta file
Primary Reference (2016) ACS Infect Dis Vol. 2: pp. 627-641
Ligand Properties
Formula C17H26N2O9P
Molecular Weight 433.370
Exact Mass 433.138
No. of atoms 55
No. of bonds 56
Polar Surface Area 180.4
LOGP Value -1.28      (Computed with XLOGP3)
0.38      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 3
No. of Hydrogen Bond Acceptors: 6
No. of Rotatable Bonds: 12
No. of Nitrogen and Oxygen Atoms: 11
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q2FWC7  
Entrez Gene IDNCBI Entrez Gene ID: 3919414  
ASDInformation of known allosteric effects of PDB entries

 
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