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Related entries of code: 5f8y
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
5f90RCSB PDB    PDBbind156aa, >5F90_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID5f8y
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NameC. grayanus lectin (CGL)
Ligand NameX6X
EC.Number E.C.-.-.-.-
Resolution 1.7(Å)
Affinity (Kd/Ki/IC50)Kd=57uM
Release Year2016
Protein/NA SequenceCheck fasta file
Primary Reference (2016) J.Am.Chem.Soc. Vol. 138: pp. 4787-4795
Ligand Properties
Formula C6H14NO5
Molecular Weight 180.179
Exact Mass 180.087
No. of atoms 26
No. of bonds 26
Polar Surface Area 117.79
LOGP Value -2.84      (Computed with XLOGP3)
-3.97      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 5
No. of Hydrogen Bond Acceptors: 4
No. of Rotatable Bonds: 5
No. of Nitrogen and Oxygen Atoms: 6
No. of Rings: 1
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): H2FH31  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries

 
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