Browse entries in the PDBbind-CN Database

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Related entries of code: 5fdd
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
4awkRCSB PDB    PDBbind183aa, >4AWK_1|Chain... at 95%
4yylRCSB PDB    PDBbind191aa, >4YYL_1|Chain... at 93%
5fdgRCSB PDB    PDBbind191aa, >5FDG_1|Chain... at 93%
5i13RCSB PDB    PDBbind191aa, >5I13_1|Chain... at 93%
5w3iRCSB PDB    PDBbind201aa, >5W3I_1|Chain... *
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID5fdd
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Nameinfluenza strain H1N1 polymerase acidic subunit N-terminal region
Ligand Name4P8
EC.Number E.C.-.-.-.-
Resolution 2.51(Å)
Affinity (Kd/Ki/IC50)IC50=63.30uM
Release Year2015
Protein/NA SequenceCheck fasta file
Primary Reference (2016) Biochemistry Vol. 55: pp. 2646-2660
Ligand Properties
Formula C14H10ClNO4
Molecular Weight 291.687
Exact Mass 291.030
No. of atoms 30
No. of bonds 31
Polar Surface Area 83.12
LOGP Value 3.96      (Computed with XLOGP3)
3.88      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 4
No. of Rotatable Bonds: 4
No. of Nitrogen and Oxygen Atoms: 5
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P03433  
Entrez Gene IDNCBI Entrez Gene ID: 956535  
ASDInformation of known allosteric effects of PDB entries

 
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