Browse entries in the PDBbind-CN Database

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Related entries of code: 5hbn
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
No similar entries are found!
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
6fh3RCSB PDB    PDBbindRPI

Entry Information
PDB ID5hbn
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NameB. subtilis ClpC N-terminal domain
Ligand NameRPI
EC.Number E.C.-.-.-.-
Resolution 1.6(Å)
Affinity (Kd/Ki/IC50)Kd=12.9uM
Release Year2016
Protein/NA SequenceCheck fasta file
Primary Reference (2016) Nature Vol. 539: pp. 48-53
Ligand Properties
Formula C6H18N4O5P
Molecular Weight 257.205
Exact Mass 257.101
No. of atoms 34
No. of bonds 33
Polar Surface Area 191.24
LOGP Value -3.72      (Computed with XLOGP3)
-3.81      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 5
No. of Rotatable Bonds: 4
No. of Nitrogen and Oxygen Atoms: 9
No. of Rings: 0
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P37571  
Entrez Gene IDNCBI Entrez Gene ID: 938481  
ASDInformation of known allosteric effects of PDB entries

 
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