Browse entries in the PDBbind-CN Database

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Related entries of code: 5ief
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
5ieeRCSB PDB    PDBbind88aa, >5IEE_2|Chain... *
5iegRCSB PDB    PDBbind88aa, >5IEG_2|Chain... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
2v3dRCSB PDB    PDBbindNBV

Entry Information
PDB ID5ief
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameMurine endoplasmic reticulum alpha-glucosidase II (Mmalpha-GluII)
Ligand NameNBV
EC.Number E.C.3.2.1.84
Resolution 2.38(Å)
Affinity (Kd/Ki/IC50)IC50=5.2uM
Release Year2016
Protein/NA SequenceCheck fasta file
Primary Reference (2016) Proc.Natl.Acad.Sci.USA Vol. 113: pp. E4630-E4638
Ligand Properties
Formula C10H22NO4
Molecular Weight 220.286
Exact Mass 220.155
No. of atoms 37
No. of bonds 37
Polar Surface Area 85.36
LOGP Value -0.63      (Computed with XLOGP3)
-1.30      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 5
No. of Hydrogen Bond Acceptors: 4
No. of Rotatable Bonds: 8
No. of Nitrogen and Oxygen Atoms: 5
No. of Rings: 1
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): O08795  Q8BHN3  
Entrez Gene IDNCBI Entrez Gene ID: 19089  14376  
ASDInformation of known allosteric effects of PDB entries

 
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