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Related entries of code: 5ifu
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
4q15RCSB PDB    PDBbind506aa, >4Q15_1|Chains... *
4wi1RCSB PDB    PDBbind506aa, >4WI1_1|Chains... at 100%
4ydqRCSB PDB    PDBbind497aa, >4YDQ_1|Chains... at 99%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!
Entry Information
PDB ID5ifu
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameProlyl-tRNA synthetase (ProRS, Proline-tRNA ligase) from Plasmodium falciparum
Ligand NameGBM
EC.Number E.C.6.1.1.15
Resolution 2.45(Å)
Affinity (Kd/Ki/IC50)IC50=34uM
Release Year2016
Protein/NA SequenceCheck fasta file
Primary Reference (2016) Acs Infect Dis. Vol(3). : pp. 34-44
Ligand Properties
Formula C23H28ClN3O5S
Molecular Weight 494.004
Exact Mass 493.144
No. of atoms 61
No. of bonds 63
Polar Surface Area 121.98
LOGP Value 4.69      (Computed with XLOGP3)
5.90      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 3
No. of Hydrogen Bond Acceptors: 4
No. of Rotatable Bonds: 11
No. of Nitrogen and Oxygen Atoms: 8
No. of Rings: 3
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q8I5R7  
Entrez Gene IDNCBI Entrez Gene ID: 811187  
ASDInformation of known allosteric effects of PDB entries
 
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