Browse entries in the PDBbind-CN Database

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Related entries of code: 5iq6
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
2j7wRCSB PDB    PDBbind635aa, >2J7W_1|Chain... at 98%
3p8zRCSB PDB    PDBbind267aa, >3P8Z_1|Chains... at 96%
3vwsRCSB PDB    PDBbind635aa, >3VWS_1|Chain... at 98%
4ctjRCSB PDB    PDBbind276aa, >4CTJ_1|Chains... at 98%
4ctkRCSB PDB    PDBbind276aa, >4CTK_1|Chains... at 98%
5cuqRCSB PDB    PDBbind267aa, >5CUQ_1|Chains... at 96%
5ehgRCSB PDB    PDBbind276aa, >5EHG_1|Chains... at 98%
5ehiRCSB PDB    PDBbind276aa, >5EHI_1|Chains... at 98%
5eifRCSB PDB    PDBbind276aa, >5EIF_1|Chains... at 98%
5eiwRCSB PDB    PDBbind276aa, >5EIW_1|Chains... at 98%
5ekxRCSB PDB    PDBbind276aa, >5EKX_1|Chains... at 98%
5f3tRCSB PDB    PDBbind635aa, >5F3T_1|Chain... at 98%
5f3zRCSB PDB    PDBbind635aa, >5F3Z_1|Chain... at 98%
5f41RCSB PDB    PDBbind635aa, >5F41_1|Chain... at 98%
5hmyRCSB PDB    PDBbind635aa, >5HMY_1|Chain... at 98%
5hn0RCSB PDB    PDBbind635aa, >5HN0_1|Chain... at 98%
5jjrRCSB PDB    PDBbind892aa, >5JJR_1|Chain... *
5jjsRCSB PDB    PDBbind892aa, >5JJS_1|Chain... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!
Entry Information
PDB ID5iq6
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameDengue virus serotype 3 RNA dependent RNA polymerase, DENV3 wt RdRp
Ligand Name6CJ
EC.Number E.C.-.-.-.-
Resolution 3(Å)
Affinity (Kd/Ki/IC50)Kd=5.5uM
Release Year2016
Protein/NA SequenceCheck fasta file
Primary Reference (2016) Antiviral Res. Vol. 134: pp. 226-235
Ligand Properties
Formula C33H30N2O6S
Molecular Weight 582.666
Exact Mass 582.182
No. of atoms 72
No. of bonds 77
Polar Surface Area 145.58
LOGP Value 6.83      (Computed with XLOGP3)
6.41      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 5
No. of Rotatable Bonds: 9
No. of Nitrogen and Oxygen Atoms: 8
No. of Rings: 6
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q6YMS4  
Entrez Gene IDNCBI Entrez Gene ID: 5075727  
ASDInformation of known allosteric effects of PDB entries
 
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