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Related entries of code: 5jnn
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
3kb3RCSB PDB    PDBbind176aa, >3KB3_1|Chain... at 99%
4la7RCSB PDB    PDBbind193aa, >4LA7_1|Chain... *
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!
Entry Information
PDB ID5jnn
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameAbscisic acid receptor PYL2
Ligand Name6LM
EC.Number E.C.-.-.-.-
Resolution 2.3(Å)
Affinity (Kd/Ki/IC50)IC50=4504nM
Release Year2016
Protein/NA SequenceCheck fasta file
Primary Reference (2016) Cell Vol. 166: pp. 881-893
Ligand Properties
Formula C15H20O5
Molecular Weight 280.316
Exact Mass 280.131
No. of atoms 40
No. of bonds 41
Polar Surface Area 83.83
LOGP Value 1.77      (Computed with XLOGP3)
1.46      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 4
No. of Rotatable Bonds: 3
No. of Nitrogen and Oxygen Atoms: 5
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): O80992  
Entrez Gene IDNCBI Entrez Gene ID: 817145  
ASDInformation of known allosteric effects of PDB entries
 
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