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Related entries of code: 5k8n
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
5k8oRCSB PDB    PDBbind425aa, >5K8O_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID5k8n
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Name5NAA-aminohydrolase (5NAA-A)
Ligand Name6R6
EC.Number E.C.3.5.99.8
Resolution 3.23(Å)
Affinity (Kd/Ki/IC50)Kd=0.48uM
Release Year2016
Protein/NA SequenceCheck fasta file
Primary Reference (2016) Nat.Chem.Biol. Vol. 12: pp. 1031-1036
Ligand Properties
Formula C7H6N2O4
Molecular Weight 182.134
Exact Mass 182.033
No. of atoms 19
No. of bonds 19
Polar Surface Area 109.14
LOGP Value 2.23      (Computed with XLOGP3)
1.98      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 4
No. of Rotatable Bonds: 0
No. of Nitrogen and Oxygen Atoms: 6
No. of Rings: 1
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): D3WZ85  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries

 
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