Browse entries in the PDBbind-CN Database

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Related entries of code: 5kzq
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
4xaqRCSB PDB    PDBbind503aa, >4XAQ_1|Chains... at 97%
4xasRCSB PDB    PDBbind503aa, >4XAS_1|Chains... at 97%
5cnjRCSB PDB    PDBbind503aa, >5CNJ_1|Chains... at 97%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID5kzq
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Namehuman metabotropic 2 glutamate (hmGlu2) amino terminal domain (ATD)
Ligand Name6YS
EC.Number E.C.-.-.-.-
Resolution 2.8(Å)
Affinity (Kd/Ki/IC50)Ki=5.3nM
Release Year2016
Protein/NA SequenceCheck fasta file
Primary Reference (2016) J. Med. Chem. Vol. 59: pp. 10974-10993
Ligand Properties
Formula C15H16F2NO5S
Molecular Weight 360.353
Exact Mass 360.072
No. of atoms 40
No. of bonds 42
Polar Surface Area 147.77
LOGP Value 0.18      (Computed with XLOGP3)
0.06      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 5
No. of Rotatable Bonds: 4
No. of Nitrogen and Oxygen Atoms: 6
No. of Rings: 3
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q14416  
Entrez Gene IDNCBI Entrez Gene ID: 2912  
ASDInformation of known allosteric effects of PDB entries

 
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