Browse entries in the PDBbind-CN Database

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Related entries of code: 5lzg
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1eeiRCSB PDB    PDBbind103aa, >1EEI_1|Chains... *
1pzjRCSB PDB    PDBbind103aa, >1PZJ_1|Chains... at 100%
5eldRCSB PDB    PDBbind103aa, >5ELD_1|Chains... at 100%
5eleRCSB PDB    PDBbind103aa, >5ELE_1|Chains... at 98%
5elfRCSB PDB    PDBbind103aa, >5ELF_1|Chains... at 98%
5lzhRCSB PDB    PDBbind103aa, >5LZH_2|Chains... at 100%
5lzjRCSB PDB    PDBbind103aa, >5LZJ_1|Chains... at 98%
6hmyRCSB PDB    PDBbind103aa, >6HMY_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
5lzhRCSB PDB    PDBbind7BN
Entry Information
PDB ID5lzg
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameCholera enterotoxin subunit B
Ligand Name7BN
EC.Number E.C.-.-.-.-
Resolution 1.13(Å)
Affinity (Kd/Ki/IC50)IC50~0.8mM
Release Year2017
Protein/NA SequenceCheck fasta file
Primary Reference (2017) Sci Rep Vol. 7: pp. 2326-2326
Ligand Properties
Formula C24H39N5O14
Molecular Weight 621.592
Exact Mass 621.249
No. of atoms 82
No. of bonds 84
Polar Surface Area 306.51
LOGP Value -4.66      (Computed with XLOGP3)
-5.55      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 10
No. of Hydrogen Bond Acceptors: 14
No. of Rotatable Bonds: 22
No. of Nitrogen and Oxygen Atoms: 19
No. of Rings: 3
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P01556  
Entrez Gene IDNCBI Entrez Gene ID: 57740119  
ASDInformation of known allosteric effects of PDB entries
 
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