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Related entries of code: 5m0m
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
3wavRCSB PDB    PDBbind831aa, >3WAV_1|Chain... at 99%
3wawRCSB PDB    PDBbind831aa, >3WAW_1|Chain... at 99%
3waxRCSB PDB    PDBbind831aa, >3WAX_1|Chain... at 99%
3wayRCSB PDB    PDBbind831aa, >3WAY_1|Chain... at 99%
4zg6RCSB PDB    PDBbind855aa, >4ZG6_1|Chains... at 92%
4zg7RCSB PDB    PDBbind806aa, >4ZG7_1|Chain... at 95%
4zg9RCSB PDB    PDBbind863aa, >4ZG9_1|Chains... at 91%
4zgaRCSB PDB    PDBbind863aa, >4ZGA_1|Chain... at 91%
5dlvRCSB PDB    PDBbind827aa, >5DLV_1|Chains... at 97%
5inhRCSB PDB    PDBbind879aa, >5INH_1|Chain... *
5lqqRCSB PDB    PDBbind827aa, >5LQQ_1|Chain... at 97%
5m0dRCSB PDB    PDBbind827aa, >5M0D_1|Chain... at 97%
5m0sRCSB PDB    PDBbind827aa, >5M0S_1|Chain... at 97%
5m7mRCSB PDB    PDBbind871aa, >5M7M_1|Chain... at 90%
5mhpRCSB PDB    PDBbind871aa, >5MHP_1|Chain... at 90%
5ohiRCSB PDB    PDBbind829aa, >5OHI_1|Chain... at 100%
5olbRCSB PDB    PDBbind844aa, >5OLB_1|Chain... at 98%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!
Entry Information
PDB ID5m0m
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameAutotaxin
Ligand Name7CF
EC.Number E.C.3.1.4.39
Resolution 2.1(Å)
Affinity (Kd/Ki/IC50)Ki=6nM
Release Year2017
Protein/NA SequenceCheck fasta file
Primary Reference (2017) J. Med. Chem. Vol. 60: pp. 2006-2017
Ligand Properties
Formula C36H52Cl2N2O5
Molecular Weight 663.714
Exact Mass 662.325
No. of atoms 97
No. of bonds 102
Polar Surface Area 99.1
LOGP Value 7.52      (Computed with XLOGP3)
7.56      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 3
No. of Hydrogen Bond Acceptors: 4
No. of Rotatable Bonds: 12
No. of Nitrogen and Oxygen Atoms: 7
No. of Rings: 6
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q64610  
Entrez Gene IDNCBI Entrez Gene ID: 84050  
ASDInformation of known allosteric effects of PDB entries
 
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