Browse entries in the PDBbind-CN Database

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Related entries of code: 5ml0
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1wugRCSB PDB    PDBbind118aa, >1WUG_1|Chain... at 96%
1wumRCSB PDB    PDBbind118aa, >1WUM_1|Chain... at 96%
5fdzRCSB PDB    PDBbind119aa, >5FDZ_1|Chains... at 100%
5fe6RCSB PDB    PDBbind119aa, >5FE6_1|Chains... at 100%
5fe7RCSB PDB    PDBbind119aa, >5FE7_1|Chains... at 100%
5fe9RCSB PDB    PDBbind119aa, >5FE9_1|Chains... at 100%
5lvqRCSB PDB    PDBbind119aa, >5LVQ_1|Chains... at 100%
5lvrRCSB PDB    PDBbind119aa, >5LVR_1|Chains... at 100%
5mkxRCSB PDB    PDBbind119aa, >5MKX_1|Chains... at 100%
6j3oRCSB PDB    PDBbind140aa, >6J3O_1|Chains... *
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!
Entry Information
PDB ID5ml0
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameHistone acetyltransferase KAT2B
Ligand NameP2L
EC.Number E.C.-.-.-.-
Resolution 1.64(Å)
Affinity (Kd/Ki/IC50)IC50=501nM
Release Year2017
Protein/NA SequenceCheck fasta file
Primary Reference (2017) J. Med. Chem. Vol. 60: pp. 695-709
Ligand Properties
Formula C11H18ClN4O
Molecular Weight 257.740
Exact Mass 257.117
No. of atoms 35
No. of bonds 36
Polar Surface Area 49.47
LOGP Value 0.68      (Computed with XLOGP3)
0.11      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 1
No. of Rotatable Bonds: 1
No. of Nitrogen and Oxygen Atoms: 5
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q9JHD1  
Entrez Gene IDNCBI Entrez Gene ID: 18519  
ASDInformation of known allosteric effects of PDB entries
 
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