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Related entries of code: 5n0f
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
4d4dRCSB PDB    PDBbind362aa, >4D4D_1|Chains... at 94%
5m77RCSB PDB    PDBbind589aa, >5M77_1|Chains... *
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!
Entry Information
PDB ID5n0f
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NameAlpha-1,6-mannanase
Ligand Name7K2
EC.Number E.C.-.-.-.-
Resolution 1.69(Å)
Affinity (Kd/Ki/IC50)Kd=0.90uM
Release Year2017
Protein/NA SequenceCheck fasta file
Primary Reference (2017) Chem. Commun. (Camb.) Vol. 53: pp. 9238-9241
Ligand Properties
Formula C12H24NO7S
Molecular Weight 326.386
Exact Mass 326.127
No. of atoms 45
No. of bonds 46
Polar Surface Area 172.52
LOGP Value -2.89      (Computed with XLOGP3)
-3.00      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 7
No. of Hydrogen Bond Acceptors: 6
No. of Rotatable Bonds: 10
No. of Nitrogen and Oxygen Atoms: 8
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q9Z4P9  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries
 
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