Browse entries in the PDBbind-CN Database

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Related entries of code: 5o1s
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
4jg6RCSB PDB    PDBbind355aa, >4JG6_1|Chain... at 98%
4jg7RCSB PDB    PDBbind355aa, >4JG7_1|Chain... at 98%
4jg8RCSB PDB    PDBbind355aa, >4JG8_1|Chain... at 98%
4m8tRCSB PDB    PDBbind355aa, >4M8T_1|Chain... at 98%
4maoRCSB PDB    PDBbind355aa, >4MAO_1|Chain... at 98%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID5o1s
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameRibosomal protein S6 kinase alpha-3
Ligand Name9HB
EC.Number E.C.2.7.11.1
Resolution 1.9(Å)
Affinity (Kd/Ki/IC50)IC50=225uM
Release Year2018
Protein/NA SequenceCheck fasta file
Primary Reference (2018) Nat Commun Vol. 9: pp. 4344-4344
Ligand Properties
Formula C6H10O4
Molecular Weight 146.141
Exact Mass 146.058
No. of atoms 20
No. of bonds 19
Polar Surface Area 52.6
LOGP Value -0.13      (Computed with XLOGP3)
0.11      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 0
No. of Hydrogen Bond Acceptors: 2
No. of Rotatable Bonds: 5
No. of Nitrogen and Oxygen Atoms: 4
No. of Rings: 0
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P18654  
Entrez Gene IDNCBI Entrez Gene ID: 110651  
ASDInformation of known allosteric effects of PDB entries

 
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