Browse entries in the PDBbind-CN Database

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Related entries of code: 5ukm
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
3ah8RCSB PDB    PDBbind78aa, >3AH8_3|Chain... *
3krwRCSB PDB    PDBbind74aa, >3KRW_3|Chain... at 90%
3krxRCSB PDB    PDBbind74aa, >3KRX_3|Chain... at 90%
3pvuRCSB PDB    PDBbind74aa, >3PVU_3|Chain... at 90%
3pvwRCSB PDB    PDBbind74aa, >3PVW_3|Chain... at 90%
4mk0RCSB PDB    PDBbind59aa, >4MK0_3|Chain... at 100%
4pnkRCSB PDB    PDBbind71aa, >4PNK_3|Chain... at 100%
5he0RCSB PDB    PDBbind71aa, >5HE0_3|Chain... at 98%
5he1RCSB PDB    PDBbind71aa, >5HE1_3|Chain... at 100%
5he2RCSB PDB    PDBbind71aa, >5HE2_3|Chain... at 100%
5he3RCSB PDB    PDBbind71aa, >5HE3_3|Chain... at 98%
5ukkRCSB PDB    PDBbind57aa, >5UKK_3|Chain... at 100%
5uklRCSB PDB    PDBbind62aa, >5UKL_3|Chain... at 98%
5wg3RCSB PDB    PDBbind71aa, >5WG3_3|Chain... at 100%
5wg4RCSB PDB    PDBbind71aa, >5WG4_3|Chain... at 100%
5wg5RCSB PDB    PDBbind71aa, >5WG5_3|Chain... at 100%
6c2yRCSB PDB    PDBbind77aa, >6C2Y_3|Chain... at 92%
6gdgRCSB PDB    PDBbind71aa, >6GDG_3|Chain... at 100%
6n4bRCSB PDB    PDBbind71aa, >6N4B_3|Chain... at 98%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!
Entry Information
PDB ID5ukm
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameG protein-coupled receptor kinase 2
Ligand NameT0E
EC.Number E.C.-.-.-.-
Resolution 3.03(Å)
Affinity (Kd/Ki/IC50)IC50=0.03uM
Release Year2017
Protein/NA SequenceCheck fasta file
Primary Reference (2017) J. Med. Chem. Vol. 60: pp. 3052-3069
Ligand Properties
Formula C24H26FN4O4
Molecular Weight 453.486
Exact Mass 453.194
No. of atoms 59
No. of bonds 63
Polar Surface Area 102.08
LOGP Value 2.61      (Computed with XLOGP3)
3.91      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 3
No. of Hydrogen Bond Acceptors: 2
No. of Rotatable Bonds: 8
No. of Nitrogen and Oxygen Atoms: 8
No. of Rings: 5
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P59768  P62873  P21146  
Entrez Gene IDNCBI Entrez Gene ID: 54331  2782  282682  
ASDInformation of known allosteric effects of PDB entries
 
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