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Related entries of code: 5uoy
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
4npvRCSB PDB    PDBbind369aa, >4NPV_1|Chain... *
5up0RCSB PDB    PDBbind361aa, >5UP0_1|Chain... at 100%
5w6eRCSB PDB    PDBbind369aa, >5W6E_1|Chain... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID5uoy
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NamePhosphodiesterase 1B
Ligand Name8HM
EC.Number E.C.-.-.-.-
Resolution 1.82(Å)
Affinity (Kd/Ki/IC50)IC50=0.027uM
Release Year2017
Protein/NA SequenceCheck fasta file
Primary Reference (2017) J. Med. Chem. Vol. 60: pp. 3472-3483
Ligand Properties
Formula C24H28N5O3S
Molecular Weight 466.576
Exact Mass 466.191
No. of atoms 61
No. of bonds 66
Polar Surface Area 103.33
LOGP Value 3.18      (Computed with XLOGP3)
3.10      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 3
No. of Rotatable Bonds: 5
No. of Nitrogen and Oxygen Atoms: 8
No. of Rings: 6
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q01064  
Entrez Gene IDNCBI Entrez Gene ID: 5153  
ASDInformation of known allosteric effects of PDB entries

 
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