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Related entries of code: 5vcz
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
5vcvRCSB PDB    PDBbind311aa, >5VCV_1|Chain... *
5vcwRCSB PDB    PDBbind311aa, >5VCW_1|Chains... at 100%
5vcxRCSB PDB    PDBbind311aa, >5VCX_1|Chain... at 100%
5vcyRCSB PDB    PDBbind311aa, >5VCY_1|Chain... at 100%
5vd0RCSB PDB    PDBbind311aa, >5VD0_1|Chain... at 100%
5vd1RCSB PDB    PDBbind311aa, >5VD1_1|Chain... at 100%
5vd3RCSB PDB    PDBbind311aa, >5VD3_1|Chain... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
5vc4RCSB PDB    PDBbindXZN

Entry Information
PDB ID5vcz
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NameMembrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase
Ligand NameXZN
EC.Number E.C.-.-.-.-
Resolution 1.5(Å)
Affinity (Kd/Ki/IC50)Kd=444nM
Release Year2017
Protein/NA SequenceCheck fasta file
Primary Reference (2017) J. Med. Chem. Vol. 60: pp. 7863-7875
Ligand Properties
Formula C26H31Cl2N5O3
Molecular Weight 532.462
Exact Mass 531.180
No. of atoms 67
No. of bonds 70
Polar Surface Area 85.28
LOGP Value 5.38      (Computed with XLOGP3)
5.57      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 3
No. of Hydrogen Bond Acceptors: 2
No. of Rotatable Bonds: 9
No. of Nitrogen and Oxygen Atoms: 8
No. of Rings: 4
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q99640  
Entrez Gene IDNCBI Entrez Gene ID: 9088  
ASDInformation of known allosteric effects of PDB entries

 
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