Browse entries in the PDBbind-CN Database

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Related entries of code: 5wzw
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
5wzsRCSB PDB    PDBbind123aa, >5WZS_1|Chain... *
5wztRCSB PDB    PDBbind123aa, >5WZT_1|Chain... at 100%
5wzuRCSB PDB    PDBbind123aa, >5WZU_1|Chain... at 100%
5wzvRCSB PDB    PDBbind123aa, >5WZV_1|Chain... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
3u8dRCSB PDB    PDBbindU8D

Entry Information
PDB ID5wzw
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameGroup IIE secretory phospholipase A2
Ligand NameU8D
EC.Number E.C.-.-.-.-
Resolution 1.95(Å)
Affinity (Kd/Ki/IC50)IC50=1.23uM
Release Year2018
Protein/NA SequenceCheck fasta file
Primary Reference (2017) Sci Rep Vol. 7: pp. 10815-10815
Ligand Properties
Formula C22H28N2O5P
Molecular Weight 431.442
Exact Mass 431.174
No. of atoms 58
No. of bonds 60
Polar Surface Area 131.53
LOGP Value 1.58      (Computed with XLOGP3)
3.49      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 4
No. of Rotatable Bonds: 9
No. of Nitrogen and Oxygen Atoms: 7
No. of Rings: 3
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q9NZK7  
Entrez Gene IDNCBI Entrez Gene ID: 30814  
ASDInformation of known allosteric effects of PDB entries

 
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