Browse entries in the PDBbind-CN Database

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Related entries of code: 5xg5
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
No similar entries are found!
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1ax0RCSB PDB    PDBbindA2G
3n35RCSB PDB    PDBbindA2G
4ocqRCSB PDB    PDBbindA2G
4xtmRCSB PDB    PDBbindA2G
Entry Information
PDB ID5xg5
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NameMITSUBA-1
Ligand NameA2G
EC.Number E.C.-.-.-.-
Resolution 1.54(Å)
Affinity (Kd/Ki/IC50)Kd=0.33mM
Release Year2017
Protein/NA SequenceCheck fasta file
Primary Reference (2017) Sci Rep Vol. 7: pp. 5943-5943
Ligand Properties
Formula C8H15NO6
Molecular Weight 221.208
Exact Mass 221.090
No. of atoms 30
No. of bonds 30
Polar Surface Area 119.25
LOGP Value -2.59      (Computed with XLOGP3)
-2.69      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 5
No. of Hydrogen Bond Acceptors: 5
No. of Rotatable Bonds: 7
No. of Nitrogen and Oxygen Atoms: 7
No. of Rings: 1
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACNo matched UniProt accession number (AC) found!
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries
 
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