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Related entries of code: 5y6k
Entries with 90% protein sequence similarity cutoff in PDBbind
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No similar entries are found!
Complexes with the same small molecule ligand
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No complexes with the same small molecule ligand are found!

Entry Information
PDB ID5y6k
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Nametransferrin
Ligand Name8R6
EC.Number E.C.-.-.-.-
Resolution 2.86(Å)
Affinity (Kd/Ki/IC50)Kd=0.86uM
Release Year2018
Protein/NA SequenceCheck fasta file
Primary Reference (2018) Metallomics Vol. 10: pp. 77-82
Ligand Properties
Formula C22H28N3O9
Molecular Weight 478.472
Exact Mass 478.183
No. of atoms 62
No. of bonds 63
Polar Surface Area 201.67
LOGP Value 0.67      (Computed with XLOGP3)
-0.01      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 3
No. of Hydrogen Bond Acceptors: 8
No. of Rotatable Bonds: 11
No. of Nitrogen and Oxygen Atoms: 12
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P02787  
Entrez Gene IDNCBI Entrez Gene ID: 7018  
ASDInformation of known allosteric effects of PDB entries

 
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