Browse entries in the PDBbind-CN Database

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Related entries of code: 5z1d
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
3wzuRCSB PDB    PDBbind324aa, >3WZU_1|Chain... *
6qhrRCSB PDB    PDBbind318aa, >6QHR_1|Chain... at 96%
6qhoRCSB PDB    PDBbind318aa, >6QHO_1|Chain... at 96%
6qg7RCSB PDB    PDBbind318aa, >6QG7_1|Chain... at 96%
6qg4RCSB PDB    PDBbind318aa, >6QG4_1|Chain... at 96%
6qftRCSB PDB    PDBbind318aa, >6QFT_1|Chain... at 96%
6ib2RCSB PDB    PDBbind318aa, >6IB2_1|Chain... at 95%
6ib0RCSB PDB    PDBbind318aa, >6IB0_1|Chain... at 96%
5z1eRCSB PDB    PDBbind324aa, >5Z1E_1|Chain... at 99%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
5z1eRCSB PDB    PDBbind95U
Entry Information
PDB ID5z1d
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameDual specificity mitogen-activated protein kinase kinase 7
Ligand Name95U
EC.Number E.C.2.7.12.2
Resolution 2.28(Å)
Affinity (Kd/Ki/IC50)IC50=5nM
Release Year2019
Protein/NA SequenceCheck fasta file
Primary Reference (2019) Cell Chem Biol Vol. 26: pp. 98-108.e5
Ligand Properties
Formula C17H17N3O
Molecular Weight 279.336
Exact Mass 279.137
No. of atoms 38
No. of bonds 40
Polar Surface Area 57.78
LOGP Value 3.23      (Computed with XLOGP3)
3.96      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 2
No. of Rotatable Bonds: 4
No. of Nitrogen and Oxygen Atoms: 4
No. of Rings: 3
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): O14733  
Entrez Gene IDNCBI Entrez Gene ID: 5609  
ASDInformation of known allosteric effects of PDB entries
 
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