Browse entries in the PDBbind-CN Database

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Related entries of code: 5z99
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
5yybRCSB PDB    PDBbind482aa, >5YYB_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
3b50RCSB PDB    PDBbindSLB
3e81RCSB PDB    PDBbindSLB
4mmpRCSB PDB    PDBbindSLB
4mnpRCSB PDB    PDBbindSLB
6h76RCSB PDB    PDBbindSLB
6h75RCSB PDB    PDBbindSLB
Entry Information
PDB ID5z99
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NameHd-SatA
Ligand NameSLB
EC.Number E.C.-.-.-.-
Resolution 1.49(Å)
Affinity (Kd/Ki/IC50)Kd=133nM
Release Year2018
Protein/NA SequenceCheck fasta file
Primary Reference (2018) J. Biol. Chem. Vol. 293: pp. 20073-20084
Ligand Properties
Formula C11H19NO9
Molecular Weight 309.270
Exact Mass 309.106
No. of atoms 40
No. of bonds 40
Polar Surface Area 176.78
LOGP Value -2.58      (Computed with XLOGP3)
-3.48      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 6
No. of Hydrogen Bond Acceptors: 8
No. of Rotatable Bonds: 10
No. of Nitrogen and Oxygen Atoms: 10
No. of Rings: 1
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q7VL18  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries
 
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