Browse entries in the PDBbind-CN Database

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Related entries of code: 5zfi
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
6ahsRCSB PDB    PDBbind224aa, >6AHS_1|Chain... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID5zfi
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Namekallikrein 7
Ligand Name9C9
EC.Number E.C.-.-.-.-
Resolution 1.8(Å)
Affinity (Kd/Ki/IC50)IC50=1.2uM
Release Year2018
Protein/NA SequenceCheck fasta file
Primary Reference (2018) Bioorg. Med. Chem. Vol. 26: pp. 3639-3653
Ligand Properties
Formula C26H29Cl2N7O2
Molecular Weight 542.460
Exact Mass 541.176
No. of atoms 66
No. of bonds 69
Polar Surface Area 94.86
LOGP Value 3.60      (Computed with XLOGP3)
3.84      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 3
No. of Rotatable Bonds: 8
No. of Nitrogen and Oxygen Atoms: 9
No. of Rings: 4
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q91VE3  
Entrez Gene IDNCBI Entrez Gene ID: 23993  
ASDInformation of known allosteric effects of PDB entries

 
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