Browse entries in the PDBbind-CN Database

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Related entries of code: 6a06
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
6a05RCSB PDB    PDBbind201aa, >6A05_1|Chains... at 100%
6a04RCSB PDB    PDBbind201aa, >6A04_1|Chains... at 100%
6a03RCSB PDB    PDBbind201aa, >6A03_1|Chains... *
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
4ksyRCSB PDB    PDBbind1SY
4lohRCSB PDB    PDBbind1SY
4lojRCSB PDB    PDBbind1SY
5vdpRCSB PDB    PDBbind1SY
Entry Information
PDB ID6a06
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameStimulator of interferon genes protein
Ligand Name1SY
EC.Number E.C.-.-.-.-
Resolution 1.79(Å)
Affinity (Kd/Ki/IC50)Kd=3.4nM
Release Year2019
Protein/NA SequenceCheck fasta file
Primary Reference (2019) J.Biol.Chem. Vol. 294: pp. 11420-11432
Ligand Properties
Formula C20H27N10O13P2
Molecular Weight 677.435
Exact Mass 677.123
No. of atoms 72
No. of bonds 78
Polar Surface Area 364.4
LOGP Value -4.82      (Computed with XLOGP3)
-2.64      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 3
No. of Hydrogen Bond Acceptors: 11
No. of Rotatable Bonds: 4
No. of Nitrogen and Oxygen Atoms: 23
No. of Rings: 7
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): B8XX90  
Entrez Gene IDNCBI Entrez Gene ID: 100217389  
ASDInformation of known allosteric effects of PDB entries
 
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