Browse entries in the PDBbind-CN Database

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Related entries of code: 6ajr
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
No similar entries are found!
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1ui0RCSB PDB    PDBbindURA
5y48RCSB PDB    PDBbindURA

Entry Information
PDB ID6ajr
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NameUracil DNA glycosylase superfamily protein
Ligand NameURA
EC.Number E.C.-.-.-.-
Resolution 1.34(Å)
Affinity (Kd/Ki/IC50)Kd=48.5uM
Release Year2019
Protein/NA SequenceCheck fasta file
Primary Reference (2019) Nat.Chem.Biol. Vol. 15: pp. 607-614
Ligand Properties
Formula C4H4N2O2
Molecular Weight 112.087
Exact Mass 112.027
No. of atoms 12
No. of bonds 12
Polar Surface Area 65.72
LOGP Value -0.97      (Computed with XLOGP3)
-0.94      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 2
No. of Rotatable Bonds: 0
No. of Nitrogen and Oxygen Atoms: 4
No. of Rings: 1
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): A0QP43  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries

 
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