Browse entries in the PDBbind-CN Database

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Related entries of code: 6apu
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
5jsqRCSB PDB    PDBbind216aa, >5JSQ_1|Chains... *
5k51RCSB PDB    PDBbind216aa, >5K51_1|Chains... at 100%
5kamRCSB PDB    PDBbind216aa, >5KAM_1|Chains... at 100%
5kapRCSB PDB    PDBbind216aa, >5KAP_1|Chains... at 100%
6apsRCSB PDB    PDBbind216aa, >6APS_1|Chains... at 100%
6aptRCSB PDB    PDBbind216aa, >6APT_1|Chains... at 100%
6apvRCSB PDB    PDBbind216aa, >6APV_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
4ranRCSB PDB    PDBbind3L6

Entry Information
PDB ID6apu
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Namehypoxanthine-guanine PRTases-1
Ligand Name3L6
EC.Number E.C.-.-.-.-
Resolution 1.84(Å)
Affinity (Kd/Ki/IC50)Ki=13.46uM
Release Year2018
Protein/NA SequenceCheck fasta file
Primary Reference (2018) PLoS Negl Trop Dis Vol. 12: pp. e0006301-e0006301
Ligand Properties
Formula C12H21N7O4P
Molecular Weight 358.313
Exact Mass 358.139
No. of atoms 45
No. of bonds 46
Polar Surface Area 193.35
LOGP Value -4.45      (Computed with XLOGP3)
-2.76      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 6
No. of Rotatable Bonds: 7
No. of Nitrogen and Oxygen Atoms: 11
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q07010  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries

 
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