Browse entries in the PDBbind-CN Database

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Related entries of code: 6arn
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
5lneRCSB PDB    PDBbind164aa, >5LNE_1|Chains... at 100%
6as8RCSB PDB    PDBbind166aa, >6AS8_1|Chains... at 100%
6aroRCSB PDB    PDBbind166aa, >6ARO_1|Chains... at 100%
6aoyRCSB PDB    PDBbind166aa, >6AOY_1|Chains... at 100%
6aoxRCSB PDB    PDBbind166aa, >6AOX_1|Chains... *
6armRCSB PDB    PDBbind166aa, >6ARM_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!
Entry Information
PDB ID6arn
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NamePutative Fml fimbrial adhesin FmlD
Ligand NameBQY
EC.Number E.C.-.-.-.-
Resolution 1.25(Å)
Affinity (Kd/Ki/IC50)Kd=6.5uM
Release Year2018
Protein/NA SequenceCheck fasta file
Primary Reference (2018) Proc.Natl.Acad.Sci.USA Vol. 115: pp. E2819-E2828
Ligand Properties
Formula C13H18O7
Molecular Weight 286.278
Exact Mass 286.105
No. of atoms 38
No. of bonds 39
Polar Surface Area 108.61
LOGP Value -0.27      (Computed with XLOGP3)
-1.13      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 4
No. of Hydrogen Bond Acceptors: 4
No. of Rotatable Bonds: 8
No. of Nitrogen and Oxygen Atoms: 7
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q1RBS0  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries
 
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