Browse entries in the PDBbind-CN Database

Display Options: Structure:  




Goto PDB code:

3D presentation of molecule is powered by 3Dmol, which supports all modern browsers and mobile devices via WebGL.

           
Hold mouse button: left to rotate,middle to shift,right to zoom

Related entries of code: 6bo6
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
6d4oRCSB PDB    PDBbind614aa, >6D4O_1|Chain... *
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID6bo6
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameGlycoside Hydrolase Family 2 candidate b-glucuronidase
Ligand NameE0V
EC.Number E.C.-.-.-.-
Resolution 2.8(Å)
Affinity (Kd/Ki/IC50)IC50=80nM
Release Year2018
Protein/NA SequenceCheck fasta file
Primary Reference (2018) ACS Cent Sci Vol. 4: pp. 868-879
Ligand Properties
Formula C21H28N7O6S
Molecular Weight 506.555
Exact Mass 506.182
No. of atoms 63
No. of bonds 67
Polar Surface Area 205.87
LOGP Value -0.47      (Computed with XLOGP3)
-0.30      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 6
No. of Hydrogen Bond Acceptors: 8
No. of Rotatable Bonds: 7
No. of Nitrogen and Oxygen Atoms: 13
No. of Rings: 5
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): C4Z6Z2  
Entrez Gene IDNCBI Entrez Gene ID: 41357285  
ASDInformation of known allosteric effects of PDB entries

 
This site has been visited times since Nov 2007.


Copyright ©2007-2024    涓婃捣鐩堣禌鎬濅俊鎭鎶鏈夐檺鍏徃    缃戠珯澶囨鍙凤細娌狪CP澶2021015625鍙-3    娌叕缃戝畨澶囷細姝e湪鐢宠涓


Technical Support锛堟妧鏈敮鎸侊級: yingsaisi@foxmail.com