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Related entries of code: 6bw5
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
No similar entries are found!
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!
Entry Information
PDB ID6bw5
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameGlcNAc-1-P-transferase
Ligand NameTUM
EC.Number E.C.-.-.-.-
Resolution 3.1(Å)
Affinity (Kd/Ki/IC50)Kd=5.6nM
Release Year2018
Protein/NA SequenceCheck fasta file
Primary Reference (2018) Nat. Struct. Mol. Biol. Vol. 25: pp. 217-224
Ligand Properties
Formula C37H60N4O16
Molecular Weight 816.889
Exact Mass 816.400
No. of atoms 117
No. of bonds 120
Polar Surface Area 311.82
LOGP Value -0.32      (Computed with XLOGP3)
-2.09      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 11
No. of Hydrogen Bond Acceptors: 12
No. of Rotatable Bonds: 29
No. of Nitrogen and Oxygen Atoms: 20
No. of Rings: 4
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q9H3H5  
Entrez Gene IDNCBI Entrez Gene ID: 1798  
ASDInformation of known allosteric effects of PDB entries
 
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