Browse entries in the PDBbind-CN Database

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Related entries of code: 6c91
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
2gfdRCSB PDB    PDBbind236aa, >2GFD_1|Chains... at 96%
2o1vRCSB PDB    PDBbind666aa, >2O1V_1|Chains... *
5in9RCSB PDB    PDBbind233aa, >5IN9_1|Chains... at 97%
5wmtRCSB PDB    PDBbind236aa, >5WMT_1|Chains... at 96%
6aolRCSB PDB    PDBbind233aa, >6AOL_1|Chain... at 97%
6aomRCSB PDB    PDBbind233aa, >6AOM_1|Chains... at 97%
6bawRCSB PDB    PDBbind236aa, >6BAW_1|Chains... at 96%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!
Entry Information
PDB ID6c91
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameEndoplasmin
Ligand NameEQD
EC.Number E.C.-.-.-.-
Resolution 2.9(Å)
Affinity (Kd/Ki/IC50)Kd=0.65uM
Release Year2018
Protein/NA SequenceCheck fasta file
Primary Reference (2018) J. Med. Chem. Vol. 61: pp. 2793-2805
Ligand Properties
Formula C18H16Cl2N2O2
Molecular Weight 363.238
Exact Mass 362.059
No. of atoms 40
No. of bonds 42
Polar Surface Area 58.28
LOGP Value 4.41      (Computed with XLOGP3)
4.43      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 3
No. of Rotatable Bonds: 7
No. of Nitrogen and Oxygen Atoms: 4
No. of Rings: 3
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P41148  
Entrez Gene IDNCBI Entrez Gene ID: 404019  
ASDInformation of known allosteric effects of PDB entries
 
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