Browse entries in the PDBbind-CN Database

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Related entries of code: 6coj
Entries with 90% protein sequence similarity cutoff in PDBbind
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No similar entries are found!
Complexes with the same small molecule ligand
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No complexes with the same small molecule ligand are found!

Entry Information
PDB ID6coj
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameIpdAB
Ligand NameF8G
EC.Number E.C.-.-.-.-
Resolution 1.4(Å)
Affinity (Kd/Ki/IC50)Kd=0.4uM
Release Year2018
Protein/NA SequenceCheck fasta file
Primary Reference (2018) Proc. Natl. Acad. Sci. U.S.A. Vol. 115: pp. E3378-E3387
Ligand Properties
Formula C32H51N7O20P3S
Molecular Weight 978.769
Exact Mass 978.212
No. of atoms 114
No. of bonds 118
Polar Surface Area 482.55
LOGP Value -5.29      (Computed with XLOGP3)
-0.60      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 5
No. of Hydrogen Bond Acceptors: 17
No. of Rotatable Bonds: 24
No. of Nitrogen and Oxygen Atoms: 27
No. of Rings: 5
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q0S7P9  Q0S7Q0  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries

 
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