Browse entries in the PDBbind-CN Database

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Related entries of code: 6csf
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
6cseRCSB PDB    PDBbind214aa, >6CSE_1|Chains... *
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
4y4vRCSB PDB    PDBbindDAL

Entry Information
PDB ID6csf
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameSodium/alanine symporter AgcS
Ligand NameDAL
EC.Number E.C.-.-.-.-
Resolution 3.3(Å)
Affinity (Kd/Ki/IC50)Kd=3.6uM
Release Year2019
Protein/NA SequenceCheck fasta file
Primary Reference (2019) Proc. Natl. Acad. Sci. U.S.A. Vol. 116: pp. 2086-2090
Ligand Properties
Formula C3H8NO2
Molecular Weight 90.101
Exact Mass 90.056
No. of atoms 14
No. of bonds 13
Polar Surface Area 64.94
LOGP Value -2.11      (Computed with XLOGP3)
-1.30      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 2
No. of Rotatable Bonds: 0
No. of Nitrogen and Oxygen Atoms: 3
No. of Rings: 0
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q6LX42  
Entrez Gene IDNCBI Entrez Gene ID: 2761075  
ASDInformation of known allosteric effects of PDB entries

 
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