Browse entries in the PDBbind-CN Database

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Related entries of code: 6czf
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
6ottRCSB PDB    PDBbind504aa, >6OTT_1|Chains... *
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
3n75RCSB PDB    PDBbindG4P
5u51RCSB PDB    PDBbindG4P
6g14RCSB PDB    PDBbindG4P
6d9sRCSB PDB    PDBbindG4P

Entry Information
PDB ID6czf
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NameAmidophosphoribosyltransferase
Ligand NameG4P
EC.Number E.C.2.4.2.14
Resolution 1.95(Å)
Affinity (Kd/Ki/IC50)Kd=1.6uM
Release Year2018
Protein/NA SequenceCheck fasta file
Primary Reference (2019) Nat. Chem. Biol. Vol. 15: pp. 141-150
Ligand Properties
Formula C10H22N5O17P4
Molecular Weight 608.200
Exact Mass 607.996
No. of atoms 58
No. of bonds 60
Polar Surface Area 413.88
LOGP Value -6.87      (Computed with XLOGP3)
-3.97      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 13
No. of Rotatable Bonds: 9
No. of Nitrogen and Oxygen Atoms: 22
No. of Rings: 3
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P0AG16  
Entrez Gene IDNCBI Entrez Gene ID: 61754604  946794  
ASDInformation of known allosteric effects of PDB entries

 
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