Browse entries in the PDBbind-CN Database

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Related entries of code: 6d3q
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
6npfRCSB PDB    PDBbind449aa, >6NPF_1|Chains... *
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
4zcwRCSB PDB    PDBbind4NG

Entry Information
PDB ID6d3q
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NameEnolase
Ligand Name4NG
EC.Number E.C.4.2.1.11
Resolution 2.24(Å)
Affinity (Kd/Ki/IC50)Ki=3.4nM
Release Year2019
Protein/NA SequenceCheck fasta file
Primary Reference (2019) Sci Rep Vol. 9: pp. 17106-17106
Ligand Properties
Formula C4H9NO6P
Molecular Weight 198.091
Exact Mass 198.017
No. of atoms 21
No. of bonds 21
Polar Surface Area 135.05
LOGP Value -3.08      (Computed with XLOGP3)
-2.03      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 6
No. of Rotatable Bonds: 2
No. of Nitrogen and Oxygen Atoms: 7
No. of Rings: 1
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P0A6P9  
Entrez Gene IDNCBI Entrez Gene ID: 61754225  945032  
ASDInformation of known allosteric effects of PDB entries

 
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